A common variant near TGFBR3 is associated with primary open angle glaucoma.

Journal: Human Molecular Genetics
Published:
Abstract

Primary open angle glaucoma (POAG), a major cause of blindness worldwide, is a complex disease with a significant genetic contribution. We performed Exome Array (Illumina) analysis on 3504 POAG cases and 9746 controls with replication of the most significant findings in 9173 POAG cases and 26 780 controls across 18 collections of Asian, African and European descent. Apart from confirming strong evidence of association at CDKN2B-AS1 (rs2157719 [G], odds ratio [OR] = 0.71, P = 2.81 × 10(-33)), we observed one SNP showing significant association to POAG (CDC7-TGFBR3 rs1192415, ORG-allele = 1.13, Pmeta = 1.60 × 10(-8)). This particular SNP has previously been shown to be strongly associated with optic disc area and vertical cup-to-disc ratio, which are regarded as glaucoma-related quantitative traits. Our study now extends this by directly implicating it in POAG disease pathogenesis.

Authors
Zheng Li, R Allingham, Masakazu Nakano, Liyun Jia, Yuhong Chen, Yoko Ikeda, Baskaran Mani, Li-jia Chen, Changwon Kee, David Garway Heath, Sarangapani Sripriya, Nobuo Fuse, Khaled Abu Amero, Chukai Huang, Prasanthi Namburi, Kathryn Burdon, Shamira Perera, Puya Gharahkhani, Ying Lin, Morio Ueno, Mineo Ozaki, Takanori Mizoguchi, Subbiah Krishnadas, Essam Osman, Mei Lee, Anita S Chan, Liza-sharmini Tajudin, Tan Do, Aurelien Goncalves, Pascal Reynier, Hong Zhang, Rupert Bourne, David Goh, David Broadway, Rahat Husain, Anil Negi, Daniel Su, Ching-lin Ho, Augusto Blanco, Christopher K Leung, Tina Wong, Azhany Yakub, Yutao Liu, Monisha Nongpiur, Jong Han, Do Hon, Balekudaru Shantha, Bowen Zhao, Jinghong Sang, Nihong Zhang, Ryuichi Sato, Kengo Yoshii, Songhomita Panda Jonas, Allison Ashley Koch, Leon Herndon, Sayoko Moroi, Pratap Challa, Jia Foo, Jin-xin Bei, Yi-xin Zeng, Cameron Simmons, Tran Bich Chau, Philomenadin Sharmila, Merwyn Chew, Blanche Lim, Pansy O Tam, Elaine Chua, Xiao Ng, Victor H Yong, Yaan Chong, Wee Meah, Saravanan Vijayan, Sohn Seongsoo, Wang Xu, Yik Teo, Jessica Cooke Bailey, Jae Kang, Jonathan Haines, Ching Cheng, Seang-mei Saw, E-shyong Tai, Douglas Gaasterland, Louis Pasquale, Jianjun Liu, Jost Jonas, Dan Milea, Ronnie George, Saleh Al Obeidan, Kazuhiko Mori, Stuart Macgregor, Alex Hewitt, Christopher Girkin, Mingzhi Zhang, Periasamy Sundaresan, Lingam Vijaya, David Mackey, Tien Wong, Jamie Craig, Xinghuai Sun, Shigeru Kinoshita, Janey Wiggs, Chiea-chuen Khor, Zhenglin Yang, Chi Pang, Ningli Wang, Michael Hauser, Kei Tashiro, Tin Aung, Eranga Vithana