Antibody targeting of conserved sites of vulnerability on the SARS-CoV-2 spike receptor-binding domain.

Journal: Structure (London, England : 1993)
Published:
Abstract

Given the continuous emergence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern (VoCs), immunotherapeutics that target conserved epitopes on the spike (S) glycoprotein have therapeutic advantages. Here, we report the crystal structure of the SARS-CoV-2 S receptor-binding domain (RBD) at 1.95 Å and describe flexibility and distinct conformations of the angiotensin-converting enzyme 2 (ACE2)-binding site. We identify a set of SARS-CoV-2-reactive monoclonal antibodies (mAbs) with broad RBD cross-reactivity including SARS-CoV-2 Omicron subvariants, SARS-CoV-1, and other sarbecoviruses and determine the crystal structures of mAb-RBD complexes with Ab246 and CR3022 mAbs targeting the class IV site, WRAIR-2134, which binds the recently designated class V epitope, and WRAIR-2123, the class I ACE2-binding site. The broad reactivity of class IV and V mAbs to conserved regions of SARS-CoV-2 VoCs and other sarbecovirus provides a framework for long-term immunotherapeutic development strategies.

Authors
Rajeshwer Sankhala, Vincent Dussupt, Wei-hung Chen, Hongjun Bai, Elizabeth Martinez, Jaime Jensen, Phyllis Rees, Agnes Hajduczki, William Chang, Misook Choe, Lianying Yan, Spencer Sterling, Isabella Swafford, Caitlin Kuklis, Sandrine Soman, Jocelyn King, Courtney Corbitt, Michelle Zemil, Caroline Peterson, Letzibeth Mendez Rivera, Samantha Townsley, Gina Donofrio, Kerri Lal, Ursula Tran, Ethan Green, Clayton Smith, Natalia De Val, Eric Laing, Christopher Broder, Jeffrey Currier, Gregory Gromowski, Lindsay Wieczorek, Morgane Rolland, Dominic Paquin Proulx, Dewald Van Dyk, Zachary Britton, Saravanan Rajan, Yueh Loo, Patrick Mctamney, Mark Esser, Victoria Polonis, Nelson Michael, Shelly Krebs, Kayvon Modjarrad, M Joyce