Genetics of Latin American Diversity Project: Insights into population genetics and association studies in admixed groups in the Americas.

Journal: Cell Genomics
Published:
Abstract

Latin Americans are underrepresented in genetic studies, increasing disparities in personalized genomic medicine. Despite available genetic data from thousands of Latin Americans, accessing and navigating the bureaucratic hurdles for consent or access remains challenging. To address this, we introduce the Genetics of Latin American Diversity (GLAD) Project, compiling genome-wide information from 53,738 Latin Americans across 39 studies representing 46 geographical regions. Through GLAD, we identified heterogeneous ancestry composition and recent gene flow across the Americas. Additionally, we developed GLAD-match, a simulated annealing-based algorithm, to match the genetic background of external samples to our database, sharing summary statistics (i.e., allele and haplotype frequencies) without transferring individual-level genotypes. Finally, we demonstrate the potential of GLAD as a critical resource for evaluating statistical genetic software in the presence of admixture. By providing this resource, we promote genomic research in Latin Americans and contribute to the promises of personalized medicine to more people.

Authors
Victor Borda, Douglas Loesch, Bing Guo, Roland Laboulaye, Diego Veliz Otani, Jennifer French, Thiago Leal, Stephanie Gogarten, Sunday Ikpe, Mateus Gouveia, Marla Mendes, Gonçalo Abecasis, Isabela Alvim, Carlos Arboleda Bustos, Gonzalo Arboleda, Humberto Arboleda, Mauricio Barreto, Lucas Barwick, Marcos Bezzera, John Blangero, Vanderci Borges, Omar Caceres, Jianwen Cai, Pedro Chana Cuevas, Zhanghua Chen, Brian Custer, Michael Dean, Carla Dinardo, Igor Domingos, Ravindranath Duggirala, Elena Dieguez, Willian Fernandez, Henrique Ferraz, Frank Gilliland, Heinner Guio, Bernardo Horta, Joanne Curran, Jill Johnsen, Robert Kaplan, Shannon Kelly, Eimear Kenny, Barbara Konkle, Charles Kooperberg, Andres Lescano, M Lima Costa, Ruth J Loos, Ani Manichaikul, Deborah Meyers, Michel Naslavsky, Deborah Nickerson, Kari North, Carlos Padilla, Michael Preuss, Victor Raggio, Alexander Reiner, Stephen Rich, Carlos Rieder, Michiel Rienstra, Jerome Rotter, Tatjana Rundek, Ralph Sacco, Cesar Sanchez, Vijay Sankaran, Bruno Santos Lobato, Artur Schumacher Schuh, Marilia Scliar, Edwin Silverman, Tamar Sofer, Jessica Lasky Su, Vitor Tumas, Scott Weiss, Timothy O'connor
Relevant Conditions

Movement Disorders